Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs4951995 chr2:30809406 A/G 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs4951996 chr2:30809462 G/A 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs4951997 chr2:30823868 A/T 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs4951998 chr2:30836154 G/A 1.33E-8 119 36.4 50.1 33.13 KM Plot
THYM rs4952000 chr2:30838344 C/T 1.38E-8 119 36.03 50.13 33.13 KM Plot
THYM rs4952003 chr2:30860906 C/T 1.38E-8 119 36.03 50.13 33.13 KM Plot
THYM rs4952004 chr2:30861454 C/G 1.38E-8 119 33.13 50.07 37.37 KM Plot
THYM rs4952124 chr2:30677126 T/C 3.24E-7 119 38.58 46.23 13.23 KM Plot
THYM rs4952126 chr2:30693536 C/T 1.29E-8 119 37.37 50.07 33.13 KM Plot
THYM rs4952127 chr2:30694118 C/G 1.29E-8 119 37.37 50.07 33.13 KM Plot
THYM rs4952128 chr2:30694169 G/A 1.29E-8 119 37.37 50.07 33.13 KM Plot
THYM rs4952129 chr2:30698180 T/C 1.29E-8 119 37.37 50.07 33.13 KM Plot
THYM rs4952130 chr2:30698287 A/T 1.29E-8 119 37.37 50.07 33.13 KM Plot
THYM rs4952131 chr2:30701239 C/A 1.29E-8 119 37.37 50.07 33.13 KM Plot
THYM rs4952132 chr2:30709395 G/C 1.29E-8 119 37.37 50.07 33.13 KM Plot